Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family transcriptional regulator | DBR11_14805 | Not Available | Positive | 3593274 - 3593963 | 26906.7 |
| hypothetical protein | DBR11_14810 | Not Available | Negative | 3594120 - 3597245 | 115457.0 |
| damage-inducible protein dinb | DBR11_14815 | Not Available | Positive | 3597313 - 3597810 | 19098.9 |
| 23s rrna pseudouridine(2604) synthase rluf | DBR11_14820 | Not Available | Positive | 3597895 - 3598896 | 36578.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DBR11_14825 | Not Available | Positive | 3598964 - 3600016 | 39916.8 |
| comf family protein | DBR11_14830 | Not Available | Positive | 3600066 - 3600764 | 26384.5 |
| serine hydroxymethyltransferase | DBR11_14835 | Not Available | Negative | 3601057 - 3602328 | 45832.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DBR11_14840 | Not Available | Positive | 3602562 - 3604490 | 70684.9 |
| hypothetical protein | DBR11_14845 | Not Available | Positive | 3604654 - 3604965 | 11167.5 |
| sigma-54-dependent fis family transcriptional regulator | DBR11_14850 | Not Available | Positive | 3605050 - 3606378 | 49420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

