Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin | DBR11_14705 | Not Available | Positive | 3570985 - 3571536 | 19530.2 |
| amidohydrolase | DBR11_14710 | Not Available | Positive | 3571659 - 3573380 | 63517.2 |
| winged helix-turn-helix domain-containing protein | DBR11_14715 | Not Available | Negative | 3573392 - 3574582 | 45648.3 |
| hypothetical protein | DBR11_14720 | Not Available | Negative | 3574613 - 3575068 | 15833.7 |
| hypothetical protein | DBR11_14725 | Not Available | Negative | 3575084 - 3577030 | 71275.5 |
| cell surface protein spra | DBR11_14730 | Not Available | Negative | 3577060 - 3578947 | 71129.7 |
| holliday junction branch migration protein ruva | DBR11_14735 | Not Available | Negative | 3578982 - 3579566 | 21356.2 |
| nadp-dependent malic enzyme | DBR11_14740 | Not Available | Negative | 3579572 - 3581887 | 84691.9 |
| lytic transglycosylase | DBR11_14745 | Not Available | Negative | 3581952 - 3583220 | 47978.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DBR11_14750 | Not Available | Negative | 3583323 - 3584765 | 52407.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

