Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_01390 | Not Available | Positive | 324633 - 325349 | 28182.9 |
| tonb-dependent receptor | DBR11_01395 | Not Available | Negative | 325359 - 327254 | 70531.0 |
| peptidase m28 | DBR11_01400 | Not Available | Negative | 327288 - 328577 | 47592.5 |
| hpp family protein | DBR11_01405 | Not Available | Negative | 328588 - 329154 | 20741.1 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DBR11_01410 | Not Available | Negative | 329178 - 330437 | 47566.8 |
| glycosyl hydrolase family 5 | DBR11_01415 | Not Available | Negative | 330526 - 332235 | 64928.9 |
| glycosyl hydrolase | DBR11_01420 | Not Available | Negative | 332242 - 333675 | 53838.8 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_01425 | Not Available | Negative | 333750 - 335252 | 55739.9 |
| tonb-dependent receptor | DBR11_01430 | Not Available | Negative | 335290 - 338385 | 113488.0 |
| transcriptional regulator | DBR11_01435 | Not Available | Negative | 338604 - 341516 | 111846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

