Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | DBR11_13815 | Not Available | Negative | 3352370 - 3353248 | 32345.7 |
| heme a synthase | DBR11_13820 | Not Available | Negative | 3353263 - 3354321 | 39792.5 |
| cytochrome c oxidase subunit i | DBR11_13825 | Not Available | Negative | 3354404 - 3356185 | 66573.2 |
| hypothetical protein | DBR11_13830 | Not Available | Negative | 3356311 - 3357561 | 46547.0 |
| quinol:cytochrome c oxidoreductase | DBR11_13835 | Not Available | Negative | 3357628 - 3358845 | 45985.4 |
| cytochrome c | DBR11_13840 | Not Available | Negative | 3358860 - 3359465 | 22048.3 |
| duf3341 domain-containing protein | DBR11_13845 | Not Available | Negative | 3359437 - 3359973 | 20045.3 |
| hydrogenase | DBR11_13850 | Not Available | Negative | 3359976 - 3361448 | 55727.3 |
| molybdopterin oxidoreductase | DBR11_13855 | Not Available | Negative | 3361472 - 3364495 | 111254.0 |
| cytochrome c | DBR11_13860 | Not Available | Negative | 3364546 - 3365838 | 47844.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

