Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DBR11_13615 | Not Available | Positive | 3302968 - 3304134 | 41828.1 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DBR11_13620 | Not Available | Positive | 3304183 - 3307359 | 114715.0 |
| hypothetical protein | DBR11_13625 | Not Available | Positive | 3307370 - 3308773 | 50938.2 |
| xylose isomerase | DBR11_13630 | Not Available | Negative | 3308926 - 3309858 | 35045.0 |
| fad:protein fmn transferase | DBR11_13635 | Not Available | Negative | 3309878 - 3310888 | 36991.1 |
| dehydrogenase | DBR11_13640 | Not Available | Negative | 3310898 - 3312217 | 49124.1 |
| sulfatase-modifying factor | DBR11_13645 | Not Available | Negative | 3312257 - 3313222 | 36672.4 |
| disulfide bond formation protein dsba | DBR11_13650 | Not Available | Negative | 3313261 - 3313782 | 19170.3 |
| glucuronyl hydrolase | DBR11_13655 | Not Available | Negative | 3313891 - 3315132 | 48011.9 |
| beta-galactosidase | DBR11_13660 | Not Available | Negative | 3315139 - 3317094 | 74623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

