Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_01290 | Not Available | Negative | 301487 - 301963 | 18199.8 |
| abc transporter atpase | DBR11_01295 | Not Available | Positive | 302015 - 302494 | 18310.7 |
| cyanophycinase | DBR11_01300 | Not Available | Negative | 302508 - 303368 | 31249.0 |
| beta-aspartyl-peptidase | DBR11_01305 | Not Available | Negative | 303377 - 304402 | 36431.3 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_01310 | Not Available | Negative | 304413 - 305813 | 51715.1 |
| susc/raga family tonb-linked outer membrane protein | DBR11_01315 | Not Available | Negative | 305824 - 309111 | 121734.0 |
| hypothetical protein | DBR11_01320 | Not Available | Negative | 309209 - 310318 | 42420.9 |
| hypothetical protein | DBR11_01325 | Not Available | Negative | 310393 - 311313 | 36218.8 |
| hypothetical protein | DBR11_01330 | Not Available | Negative | 310967 - 313564 | 99291.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DBR11_01335 | Not Available | Negative | 313741 - 314463 | 27649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

