Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DBR11_13410 | Not Available | Negative | 3259739 - 3261100 | 49310.0 |
| aaa family atpase | DBR11_13415 | Not Available | Negative | 3261138 - 3261773 | 24209.2 |
| duf4442 domain-containing protein | DBR11_13420 | Not Available | Negative | 3261801 - 3262286 | 18749.9 |
| phosphoribosylpyrophosphate synthetase | DBR11_13425 | Not Available | Positive | 3262366 - 3262671 | 11520.7 |
| coproporphyrinogen iii oxidase | DBR11_13430 | Not Available | Positive | 3262772 - 3262972 | 6984.35 |
| mfs transporter | DBR11_13435 | Not Available | Positive | 3263080 - 3264300 | 44590.7 |
| oxygen-dependent coproporphyrinogen oxidase | DBR11_13440 | Not Available | Positive | 3264367 - 3265263 | 34661.8 |
| dna gyrase subunit a | DBR11_13445 | Not Available | Positive | 3265359 - 3267953 | 96895.0 |
| gliding motility protein gldl | DBR11_13450 | Not Available | Positive | 3268091 - 3268897 | 28668.2 |
| gliding motility protein gldm | DBR11_13455 | Not Available | Positive | 3268939 - 3270477 | 55111.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

