Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DBR11_12900 | Not Available | Negative | 3147407 - 3148225 | 30402.3 |
| glutamyl-trna reductase | DBR11_12905 | Not Available | Positive | 3148397 - 3149623 | 46855.0 |
| hydroxymethylbilane synthase | DBR11_12910 | Not Available | Positive | 3149663 - 3151246 | 58870.5 |
| porphobilinogen synthase | DBR11_12915 | Not Available | Positive | 3151262 - 3152230 | 35705.9 |
| glutamate-1-semialdehyde-2,1-aminomutase | DBR11_12920 | Not Available | Positive | 3152283 - 3153605 | 48130.7 |
| two-component sensor histidine kinase | DBR11_12925 | Not Available | Positive | 3153638 - 3154504 | 32236.3 |
| dna-binding response regulator | DBR11_12930 | Not Available | Positive | 3154510 - 3155217 | 27424.4 |
| hypothetical protein | DBR11_12935 | Not Available | Positive | 3155217 - 3155732 | 19561.0 |
| uroporphyrinogen decarboxylase | DBR11_12940 | Not Available | Positive | 3155749 - 3156771 | 37970.2 |
| protoporphyrinogen ix oxidase | DBR11_12945 | Not Available | Positive | 3156778 - 3157320 | 20937.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

