Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DBR11_12850 | Not Available | Negative | 3137307 - 3138074 | 28521.2 |
| carbamoyl phosphate synthase small subunit | DBR11_12855 | Not Available | Negative | 3138173 - 3139285 | 40976.8 |
| n-acetyltransferase | DBR11_12860 | Not Available | Positive | 3139468 - 3140070 | 23019.1 |
| short-chain dehydrogenase | DBR11_12865 | Not Available | Positive | 3140137 - 3140832 | 25350.6 |
| pspc family transcriptional regulator | DBR11_12870 | Not Available | Positive | 3140847 - 3141509 | 24916.7 |
| hypothetical protein | DBR11_12875 | Not Available | Positive | 3141548 - 3142498 | 34930.7 |
| rdd family protein | DBR11_12880 | Not Available | Positive | 3142498 - 3143097 | 22843.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DBR11_12885 | Not Available | Positive | 3143127 - 3145106 | 73721.7 |
| mfs transporter | DBR11_12890 | Not Available | Positive | 3145147 - 3146400 | 45790.2 |
| hypothetical protein | DBR11_12895 | Not Available | Negative | 3146402 - 3147355 | 35535.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

