Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_12700 | Not Available | Negative | 3112646 - 3113185 | 20994.3 |
| cysteine desulfurase | DBR11_12705 | Not Available | Negative | 3113172 - 3114320 | 42105.5 |
| phosphoglucosamine mutase | DBR11_12710 | Not Available | Negative | 3114327 - 3115715 | 49797.0 |
| sam-dependent methyltransferase | DBR11_12715 | Not Available | Positive | 3115891 - 3116622 | 28795.3 |
| phosphatase pap2 family protein | DBR11_12720 | Not Available | Positive | 3116619 - 3117182 | 21376.8 |
| zinc/iron permease | DBR11_12725 | Not Available | Positive | 3117183 - 3117902 | 26399.9 |
| marr family transcriptional regulator | DBR11_12730 | Not Available | Negative | 3117899 - 3118348 | 17278.2 |
| exonuclease | DBR11_12735 | Not Available | Negative | 3118516 - 3119457 | 35922.4 |
| dephospho-coa kinase | DBR11_12740 | Not Available | Negative | 3119458 - 3120054 | 22045.7 |
| hypothetical protein | DBR11_12745 | Not Available | Negative | 3120054 - 3121001 | 36431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

