Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DBR11_12645 | Not Available | Positive | 3099840 - 3100406 | 22124.9 |
| anti-sigma factor | DBR11_12650 | Not Available | Positive | 3100483 - 3101598 | 41448.6 |
| hypothetical protein | DBR11_12655 | Not Available | Positive | 3101705 - 3105325 | 132905.0 |
| hypothetical protein | DBR11_12660 | Not Available | Positive | 3105297 - 3106796 | 54772.6 |
| hypothetical protein | DBR11_12665 | Not Available | Positive | 3106807 - 3107991 | 44347.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DBR11_12670 | Not Available | Negative | 3108069 - 3108479 | 15099.2 |
| hypothetical protein | DBR11_12680 | Not Available | Positive | 3109262 - 3109900 | 24383.9 |
| hypothetical protein | DBR11_12685 | Not Available | Positive | 3109937 - 3110797 | 32570.9 |
| hypothetical protein | DBR11_12690 | Not Available | Negative | 3110862 - 3111941 | 40803.2 |
| isochorismate-pyruvate lyase | DBR11_12695 | Not Available | Negative | 3112016 - 3112339 | 12563.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

