Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DBR11_01190 | Not Available | Positive | 279923 - 281449 | 55739.5 |
| rod shape-determining protein | DBR11_01195 | Not Available | Positive | 281538 - 282560 | 36814.1 |
| rod shape-determining protein mrec | DBR11_01200 | Not Available | Positive | 282590 - 283426 | 31308.7 |
| rod shape-determining protein mred | DBR11_01205 | Not Available | Positive | 283419 - 283934 | 19725.8 |
| penicillin-binding protein 2 | DBR11_01210 | Not Available | Positive | 283934 - 285883 | 72338.1 |
| rod shape-determining protein roda | DBR11_01215 | Not Available | Positive | 285880 - 287148 | 47114.3 |
| hypothetical protein | DBR11_01220 | Not Available | Negative | 287141 - 288217 | 40864.1 |
| thymidine kinase | DBR11_01225 | Not Available | Positive | 288322 - 288897 | 21210.6 |
| lysr family transcriptional regulator | DBR11_01230 | Not Available | Negative | 288900 - 289775 | 33000.5 |
| mfs transporter | DBR11_01235 | Not Available | Positive | 289881 - 291113 | 45173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

