Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DBR11_12495 | Not Available | Positive | 3054380 - 3055237 | 32768.7 |
| hypothetical protein | DBR11_12500 | Not Available | Negative | 3055373 - 3058093 | 101808.0 |
| peptidase m1 | DBR11_12505 | Not Available | Positive | 3058380 - 3060071 | 64362.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | DBR11_12510 | Not Available | Negative | 3060074 - 3061555 | 54547.4 |
| arabinan endo-1,5-alpha-l-arabinosidase | DBR11_12515 | Not Available | Negative | 3061579 - 3062592 | 37522.6 |
| alpha-l-arabinofuranosidase | DBR11_12520 | Not Available | Negative | 3062589 - 3064571 | 74395.7 |
| glycoside hydrolase | DBR11_12525 | Not Available | Negative | 3064573 - 3065553 | 36741.5 |
| alpha-n-arabinofuranosidase | DBR11_12530 | Not Available | Negative | 3065561 - 3067108 | 57495.9 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_12535 | Not Available | Negative | 3067125 - 3068678 | 58518.0 |
| tonb-dependent receptor | DBR11_12540 | Not Available | Negative | 3068708 - 3071782 | 112882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

