Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_12340 | Not Available | Negative | 3016731 - 3017261 | 19944.3 |
| iron-sulfur cluster assembly accessory protein | DBR11_12345 | Not Available | Positive | 3017425 - 3017778 | 12733.1 |
| abc transporter | DBR11_12350 | Not Available | Positive | 3017879 - 3019111 | 43856.1 |
| dtdp-glucose 4,6-dehydratase | DBR11_12355 | Not Available | Negative | 3019166 - 3019296 | 5009.56 |
| hypothetical protein | DBR11_12360 | Not Available | Positive | 3019297 - 3022024 | 101266.0 |
| sugar-binding protein | DBR11_12365 | Not Available | Positive | 3022029 - 3025568 | 129567.0 |
| hypothetical protein | DBR11_12370 | Not Available | Positive | 3025584 - 3025849 | 10572.0 |
| hypothetical protein | DBR11_12375 | Not Available | Negative | 3025850 - 3027108 | 47019.4 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_12380 | Not Available | Negative | 3027120 - 3028553 | 52998.9 |
| susc/raga family tonb-linked outer membrane protein | DBR11_12385 | Not Available | Negative | 3028559 - 3031867 | 121415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

