Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | DBR11_12285 | Not Available | Negative | 3004653 - 3005012 | 13799.8 |
| acyl-coa dehydrogenase | DBR11_12290 | Not Available | Positive | 3005158 - 3006348 | 43790.9 |
| hypothetical protein | DBR11_12295 | Not Available | Positive | 3006394 - 3009081 | 103888.0 |
| atpase | DBR11_12300 | Not Available | Positive | 3009068 - 3009451 | 14709.9 |
| diaminopimelate decarboxylase | DBR11_12305 | Not Available | Negative | 3009762 - 3010916 | 42982.0 |
| aspartate kinase | DBR11_12310 | Not Available | Negative | 3011108 - 3012379 | 47011.7 |
| hypothetical protein | DBR11_12320 | Not Available | Positive | 3012533 - 3012937 | 15278.5 |
| dna mismatch repair protein mutt | DBR11_12325 | Not Available | Positive | 3012944 - 3013489 | 20917.9 |
| chromosomal replication initiator protein dnaa | DBR11_12330 | Not Available | Negative | 3013556 - 3014986 | 53895.2 |
| methylmalonyl-coa mutase | DBR11_12335 | Not Available | Negative | 3015181 - 3016728 | 57167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

