Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DBR11_12230 | Not Available | Positive | 2989656 - 2990225 | 22060.1 |
| alkaline phosphatase | DBR11_12235 | Not Available | Positive | 2990315 - 2991205 | 32142.9 |
| tigr03364 family fad-dependent oxidoreductase | DBR11_12245 | Not Available | Positive | 2992647 - 2993807 | 43896.1 |
| mfs transporter | DBR11_12250 | Not Available | Positive | 2994222 - 2995448 | 44500.8 |
| trehalase | DBR11_12255 | Not Available | Positive | 2995465 - 2996967 | 57801.2 |
| tonb-dependent receptor | DBR11_12260 | Not Available | Positive | 2996987 - 2999638 | 96069.8 |
| alpha-mannosidase | DBR11_12265 | Not Available | Positive | 2999808 - 3002084 | 86035.0 |
| heat-shock protein | DBR11_12270 | Not Available | Negative | 3002142 - 3002573 | 16381.2 |
| acyl-coa thioesterase | DBR11_12275 | Not Available | Positive | 3002661 - 3003152 | 19186.3 |
| fad-binding oxidoreductase | DBR11_12280 | Not Available | Negative | 3003199 - 3004596 | 51042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

