Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | DBR11_11980 | Not Available | Negative | 2926713 - 2929140 | 89815.5 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_11985 | Not Available | Negative | 2929146 - 2930597 | 53040.8 |
| susc/raga family tonb-linked outer membrane protein | DBR11_11990 | Not Available | Negative | 2930616 - 2933789 | 114754.0 |
| hypothetical protein | DBR11_11995 | Not Available | Positive | 2934193 - 2935119 | 34680.6 |
| cysteine desulfurase | DBR11_12000 | Not Available | Positive | 2935123 - 2936862 | 62682.6 |
| dinb family protein | DBR11_12005 | Not Available | Negative | 2936925 - 2937464 | 20771.9 |
| hypothetical protein | DBR11_12010 | Not Available | Negative | 2937504 - 2938997 | 55274.5 |
| arac family transcriptional regulator | DBR11_12015 | Not Available | Positive | 2939062 - 2939910 | 33592.6 |
| deaminase | DBR11_12020 | Not Available | Positive | 2939987 - 2941315 | 48866.7 |
| hypothetical protein | DBR11_12025 | Not Available | Negative | 2941312 - 2941896 | 21947.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

