Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_11730 | Not Available | Positive | 2872838 - 2873419 | 21959.3 |
| amino acid abc transporter substrate-binding protein | DBR11_11735 | Not Available | Positive | 2873567 - 2874247 | 26363.2 |
| hypothetical protein | DBR11_11740 | Not Available | Negative | 2874244 - 2874468 | 8470.12 |
| hypothetical protein | DBR11_11745 | Not Available | Negative | 2874492 - 2875001 | 19233.4 |
| osmc family peroxiredoxin | DBR11_11750 | Not Available | Positive | 2875409 - 2875846 | 15238.0 |
| phytoene synthase | DBR11_11755 | Not Available | Positive | 2875947 - 2876562 | 23428.1 |
| hypothetical protein | DBR11_11760 | Not Available | Positive | 2876559 - 2877032 | 18307.3 |
| beta-carotene hydroxylase | DBR11_11765 | Not Available | Positive | 2877035 - 2877496 | 18427.7 |
| lycopene cyclase | DBR11_11770 | Not Available | Positive | 2877499 - 2878653 | 44399.4 |
| marr family transcriptional regulator | DBR11_11775 | Not Available | Positive | 2878693 - 2879301 | 22971.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

