Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | DBR11_11680 | Not Available | Positive | 2857744 - 2858871 | 41810.8 |
| fadr family transcriptional regulator | DBR11_11685 | Not Available | Negative | 2858910 - 2859617 | 26858.1 |
| hypothetical protein | DBR11_11690 | Not Available | Positive | 2859923 - 2863222 | 121419.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_11695 | Not Available | Positive | 2863230 - 2864867 | 60787.0 |
| dihydrodipicolinate synthetase | DBR11_11700 | Not Available | Positive | 2864943 - 2865872 | 34408.5 |
| galactose oxidase | DBR11_11705 | Not Available | Positive | 2865890 - 2867074 | 42835.3 |
| mfs transporter | DBR11_11710 | Not Available | Positive | 2867068 - 2868312 | 45599.5 |
| sialate o-acetylesterase | DBR11_11715 | Not Available | Positive | 2868321 - 2870396 | 78170.6 |
| n-acylglucosamine 2-epimerase | DBR11_11720 | Not Available | Positive | 2870404 - 2871585 | 45798.4 |
| exo-alpha-sialidase | DBR11_11725 | Not Available | Positive | 2871582 - 2872760 | 43513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

