Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_11080 | Not Available | Positive | 2716798 - 2716938 | 5348.59 |
| hypothetical protein | DBR11_11085 | Not Available | Positive | 2716956 - 2717135 | 6934.23 |
| rna polymerase subunit sigma-70 | DBR11_11090 | Not Available | Positive | 2717394 - 2717978 | 22424.8 |
| hypothetical protein | DBR11_11095 | Not Available | Negative | 2717975 - 2718094 | 4430.36 |
| deaminase | DBR11_11100 | Not Available | Negative | 2718168 - 2718737 | 20773.8 |
| anti-sigma factor | DBR11_11105 | Not Available | Positive | 2718940 - 2720103 | 43056.3 |
| susc/raga family tonb-linked outer membrane protein | DBR11_11110 | Not Available | Positive | 2720331 - 2723645 | 122646.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_11115 | Not Available | Positive | 2723672 - 2725180 | 56278.5 |
| ld-carboxypeptidase | DBR11_11120 | Not Available | Negative | 2725414 - 2726316 | 33538.6 |
| methionine--trna ligase | DBR11_11125 | Not Available | Positive | 2726357 - 2728465 | 80047.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

