Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DBR11_10780 | Not Available | Positive | 2648813 - 2649520 | 25958.8 |
| ribosome recycling factor | DBR11_10785 | Not Available | Positive | 2649561 - 2650124 | 20837.4 |
| abc transporter atp-binding protein | DBR11_10790 | Not Available | Positive | 2650249 - 2652000 | 65636.4 |
| mfs transporter | DBR11_10795 | Not Available | Negative | 2651997 - 2653286 | 46967.9 |
| thiamine phosphate synthase | DBR11_10800 | Not Available | Negative | 2653356 - 2653988 | 23180.8 |
| tonb-dependent receptor | DBR11_10805 | Not Available | Negative | 2654006 - 2656465 | 91410.8 |
| nadr | DBR11_10810 | Not Available | Negative | 2656684 - 2657211 | 20285.4 |
| nicotinamide riboside transporter pnuc | DBR11_10815 | Not Available | Negative | 2657195 - 2657812 | 24082.9 |
| carboxypeptidase regulatory-like domain-containing protein | DBR11_10820 | Not Available | Positive | 2658118 - 2658438 | 11532.5 |
| carbamoyl-phosphate synthase large subunit | DBR11_10825 | Not Available | Positive | 2658586 - 2661402 | 104224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

