Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_10580 | Not Available | Negative | 2608726 - 2609364 | 23823.9 |
| hypothetical protein | DBR11_10585 | Not Available | Negative | 2609674 - 2609994 | 11069.8 |
| aminoglycoside 6-adenylyltransferase | DBR11_10590 | Not Available | Positive | 2610295 - 2610938 | 25507.2 |
| susc/raga family protein | DBR11_10595 | Not Available | Positive | 2611254 - 2614337 | 113114.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_10600 | Not Available | Positive | 2614358 - 2615857 | 55926.1 |
| thiamine biosynthesis protein this | DBR11_10605 | Not Available | Positive | 2616598 - 2616801 | 7397.83 |
| phosphomethylpyrimidine synthase thic | DBR11_10610 | Not Available | Positive | 2616805 - 2618601 | 66955.9 |
| hypothetical protein | DBR11_10615 | Not Available | Positive | 2618601 - 2619200 | 23235.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | DBR11_10620 | Not Available | Positive | 2619128 - 2619925 | 28848.3 |
| thiamine phosphate synthase | DBR11_10625 | Not Available | Positive | 2619918 - 2620568 | 24080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

