Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ap endonuclease | DBR11_10375 | Not Available | Negative | 2549944 - 2551299 | 49079.0 |
| glycoside hydrolase family 2 | DBR11_10380 | Not Available | Negative | 2551494 - 2553992 | 93408.8 |
| glycoside hydrolase | DBR11_10385 | Not Available | Negative | 2554005 - 2555924 | 72588.7 |
| hypothetical protein | DBR11_10390 | Not Available | Negative | 2555935 - 2556612 | 24868.8 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_10395 | Not Available | Negative | 2556624 - 2558456 | 69384.6 |
| susc/raga family tonb-linked outer membrane protein | DBR11_10400 | Not Available | Negative | 2558475 - 2561603 | 115904.0 |
| hypothetical protein | DBR11_10405 | Not Available | Negative | 2561768 - 2564623 | 107964.0 |
| hypothetical protein | DBR11_10415 | Not Available | Negative | 2565898 - 2566077 | 6683.43 |
| hypothetical protein | DBR11_10420 | Not Available | Negative | 2566268 - 2568514 | 84720.0 |
| ahpc/tsa family protein | DBR11_10425 | Not Available | Negative | 2568541 - 2569137 | 22589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

