Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_10325 | Not Available | Negative | 2532087 - 2533499 | 51491.3 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_10330 | Not Available | Negative | 2533528 - 2535120 | 59476.3 |
| susc/raga family tonb-linked outer membrane protein | DBR11_10335 | Not Available | Negative | 2535141 - 2538254 | 112982.0 |
| alpha-xylosidase | DBR11_10340 | Not Available | Negative | 2538322 - 2541174 | 109414.0 |
| hypothetical protein | DBR11_10345 | Not Available | Negative | 2541287 - 2542054 | 29351.4 |
| hybrid sensor histidine kinase/response regulator | DBR11_10350 | Not Available | Negative | 2542108 - 2545533 | 130566.0 |
| hypothetical protein | DBR11_10355 | Not Available | Positive | 2546000 - 2546977 | 37687.6 |
| sam-dependent methyltransferase | DBR11_10360 | Not Available | Positive | 2547087 - 2547722 | 24120.5 |
| arac family transcriptional regulator | DBR11_10365 | Not Available | Positive | 2547746 - 2548894 | 44727.7 |
| hypothetical protein | DBR11_10370 | Not Available | Positive | 2548972 - 2549799 | 31783.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

