Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR11_10275 | Not Available | Positive | 2515935 - 2519165 | 116375.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_10280 | Not Available | Positive | 2519190 - 2520662 | 53221.0 |
| amidohydrolase | DBR11_10285 | Not Available | Positive | 2520607 - 2522388 | 65378.1 |
| alkanesulfonate monooxygenase | DBR11_10290 | Not Available | Positive | 2522388 - 2523557 | 43782.9 |
| amino acid transporter | DBR11_10295 | Not Available | Positive | 2523560 - 2525002 | 52125.9 |
| hypothetical protein | DBR11_10300 | Not Available | Positive | 2525041 - 2525427 | 13803.8 |
| esterase | DBR11_10305 | Not Available | Negative | 2525462 - 2527015 | 57254.0 |
| abc transporter | DBR11_10310 | Not Available | Positive | 2527167 - 2527940 | 28545.8 |
| hypothetical protein | DBR11_10315 | Not Available | Positive | 2527946 - 2529646 | 64398.0 |
| glycoside hydrolase family 2 | DBR11_10320 | Not Available | Negative | 2529652 - 2532075 | 91074.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

