Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40 repeat domain-containing protein | DBR11_10020 | Not Available | Negative | 2454644 - 2455540 | 33903.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | DBR11_10025 | Not Available | Negative | 2455546 - 2456136 | 22442.8 |
| imidazole glycerol phosphate synthase subunit hisf | DBR11_10030 | Not Available | Negative | 2456133 - 2456888 | 26692.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DBR11_10035 | Not Available | Negative | 2456892 - 2457641 | 27987.0 |
| imidazole glycerol phosphate synthase subunit hish | DBR11_10040 | Not Available | Negative | 2457643 - 2458236 | 22149.7 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | DBR11_10045 | Not Available | Negative | 2458238 - 2459371 | 42454.4 |
| histidinol-phosphate transaminase | DBR11_10050 | Not Available | Negative | 2459380 - 2460420 | 38740.6 |
| histidinol dehydrogenase | DBR11_10055 | Not Available | Negative | 2460410 - 2461708 | 46294.2 |
| atp phosphoribosyltransferase | DBR11_10060 | Not Available | Negative | 2461752 - 2462603 | 30730.4 |
| l,d-transpeptidase | DBR11_10065 | Not Available | Positive | 2462812 - 2464431 | 62195.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

