Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c26 | DBR11_09970 | Not Available | Positive | 2434969 - 2435682 | 27202.2 |
| aldehyde dehydrogenase | DBR11_09975 | Not Available | Positive | 2435679 - 2437046 | 50639.5 |
| hypothetical protein | DBR11_09980 | Not Available | Negative | 2437053 - 2438132 | 40308.2 |
| 1,4-beta-xylanase | DBR11_09985 | Not Available | Negative | 2438137 - 2439282 | 44305.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | DBR11_09990 | Not Available | Negative | 2439308 - 2440390 | 39374.4 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_09995 | Not Available | Negative | 2440413 - 2441939 | 58897.0 |
| tonb-dependent receptor | DBR11_10000 | Not Available | Negative | 2441951 - 2445001 | 112390.0 |
| hybrid sensor histidine kinase/response regulator | DBR11_10005 | Not Available | Positive | 2445259 - 2449194 | 149615.0 |
| hypothetical protein | DBR11_10010 | Not Available | Positive | 2449237 - 2453874 | 175465.0 |
| hypothetical protein | DBR11_10015 | Not Available | Positive | 2453900 - 2454640 | 28303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

