Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DBR11_09870 | Not Available | Negative | 2409786 - 2413052 | 119736.0 |
| polysaccharide deacetylase | DBR11_09875 | Not Available | Negative | 2413211 - 2414059 | 32272.7 |
| peptidase c39 | DBR11_09880 | Not Available | Negative | 2414104 - 2416260 | 80759.1 |
| secretion protein hlyd | DBR11_09885 | Not Available | Negative | 2416265 - 2417437 | 44134.7 |
| hypothetical protein | DBR11_09890 | Not Available | Negative | 2417645 - 2417852 | 6782.29 |
| hypothetical protein | DBR11_09895 | Not Available | Negative | 2417856 - 2418065 | 7601.35 |
| proline--trna ligase | DBR11_09900 | Not Available | Positive | 2418305 - 2419777 | 55807.3 |
| cystathionine gamma-synthase | DBR11_09905 | Not Available | Positive | 2419910 - 2421049 | 41990.5 |
| tigr02757 family protein | DBR11_09910 | Not Available | Positive | 2421056 - 2421919 | 33472.1 |
| hypothetical protein | DBR11_09915 | Not Available | Positive | 2421976 - 2422482 | 19266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

