Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_09820 | Not Available | Positive | 2401139 - 2402878 | 66870.7 |
| rhomboid family intramembrane serine protease | DBR11_09825 | Not Available | Positive | 2402880 - 2403509 | 24059.7 |
| hypothetical protein | DBR11_09830 | Not Available | Negative | 2403506 - 2404471 | 37147.5 |
| dipeptide epimerase | DBR11_09835 | Not Available | Positive | 2404560 - 2405594 | 38254.2 |
| hypothetical protein | DBR11_09840 | Not Available | Negative | 2405569 - 2405769 | 7710.64 |
| nadh oxidase | DBR11_09845 | Not Available | Negative | 2405771 - 2406088 | 11927.3 |
| duf4407 domain-containing protein | DBR11_09850 | Not Available | Positive | 2406241 - 2407329 | 41303.8 |
| peptidase m28 | DBR11_09855 | Not Available | Positive | 2407338 - 2408651 | 48582.2 |
| n-acetyltransferase | DBR11_09860 | Not Available | Negative | 2408656 - 2409153 | 18846.0 |
| thiamine pyrophosphokinase | DBR11_09865 | Not Available | Negative | 2409150 - 2409713 | 21306.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

