Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DBR11_09720 | Not Available | Negative | 2376513 - 2377928 | 53155.3 |
| alpha-galactosidase | DBR11_09725 | Not Available | Positive | 2378185 - 2380320 | 80862.1 |
| hypothetical protein | DBR11_09730 | Not Available | Negative | 2380327 - 2380947 | 23067.8 |
| rna polymerase sigma-70 factor | DBR11_09735 | Not Available | Positive | 2381889 - 2382509 | 24279.5 |
| hypothetical protein | DBR11_09740 | Not Available | Positive | 2382600 - 2383565 | 36264.5 |
| susc/raga family protein | DBR11_09745 | Not Available | Positive | 2383597 - 2387229 | 135100.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_09750 | Not Available | Positive | 2387241 - 2388740 | 55932.3 |
| hypothetical protein | DBR11_09755 | Not Available | Positive | 2388750 - 2390078 | 49640.1 |
| hypothetical protein | DBR11_09760 | Not Available | Positive | 2390336 - 2390701 | 14460.5 |
| hypothetical protein | DBR11_09765 | Not Available | Positive | 2390806 - 2391228 | 15946.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

