Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | DBR11_09520 | Not Available | Positive | 2326082 - 2326738 | 24525.7 |
| ssra-binding protein | DBR11_09525 | Not Available | Negative | 2326740 - 2327195 | 17847.8 |
| iron/manganese transporter | DBR11_09530 | Not Available | Negative | 2327245 - 2329107 | 68472.9 |
| iron-dependent repressor | DBR11_09535 | Not Available | Negative | 2329130 - 2329786 | 24753.8 |
| asnc family transcriptional regulator | DBR11_09540 | Not Available | Positive | 2329926 - 2330027 | 3828.77 |
| hypothetical protein | DBR11_09545 | Not Available | Negative | 2330035 - 2330496 | 17810.5 |
| hypothetical protein | DBR11_09550 | Not Available | Positive | 2330529 - 2330930 | 15648.0 |
| hypothetical protein | DBR11_09555 | Not Available | Negative | 2331250 - 2331519 | 9705.3 |
| radical sam protein | DBR11_09560 | Not Available | Negative | 2331513 - 2332913 | 53664.6 |
| diacylglyceryl transferase | DBR11_09565 | Not Available | Negative | 2332906 - 2333655 | 28326.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

