Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_09315 | Not Available | Negative | 2277507 - 2277743 | 9218.82 |
| xre family transcriptional regulator | DBR11_09320 | Not Available | Positive | 2278460 - 2278612 | 5827.24 |
| tonb-dependent receptor | DBR11_09325 | Not Available | Positive | 2279071 - 2282217 | 117841.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_09330 | Not Available | Positive | 2282229 - 2284061 | 68997.2 |
| hypothetical protein | DBR11_09335 | Not Available | Positive | 2284081 - 2284797 | 26514.8 |
| xylosidase | DBR11_09340 | Not Available | Positive | 2284794 - 2286062 | 48154.5 |
| hypothetical protein | DBR11_09345 | Not Available | Positive | 2286096 - 2286731 | 23475.9 |
| glycosyl hydrolase family 43 | DBR11_09350 | Not Available | Positive | 2286742 - 2287761 | 38172.8 |
| aspartate racemase | DBR11_09360 | Not Available | Negative | 2289272 - 2289952 | 25275.6 |
| marr family transcriptional regulator | DBR11_09365 | Not Available | Negative | 2290642 - 2291079 | 16332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

