Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR11_09055 | Not Available | Positive | 2214517 - 2217684 | 116963.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_09060 | Not Available | Positive | 2217695 - 2219512 | 68736.6 |
| hypothetical protein | DBR11_09065 | Not Available | Positive | 2219527 - 2220591 | 38386.9 |
| eve domain-containing protein | DBR11_09075 | Not Available | Positive | 2221252 - 2221665 | 15870.9 |
| hypothetical protein | DBR11_09080 | Not Available | Positive | 2221827 - 2222318 | 18780.4 |
| sodium:proton antiporter | DBR11_09085 | Not Available | Negative | 2222323 - 2223510 | 43713.1 |
| acyl-coa thioesterase | DBR11_09090 | Not Available | Negative | 2223527 - 2224048 | 19277.4 |
| alpha-amylase | DBR11_09095 | Not Available | Positive | 2224129 - 2225619 | 57160.9 |
| duf5103 domain-containing protein | DBR11_09100 | Not Available | Negative | 2225616 - 2226884 | 49222.0 |
| abc transporter atp-binding protein | DBR11_09105 | Not Available | Negative | 2226881 - 2228800 | 72364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

