Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_08905 | Not Available | Positive | 2170892 - 2172055 | 41335.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DBR11_08910 | Not Available | Positive | 2172072 - 2172551 | 17399.1 |
| hypothetical protein | DBR11_08915 | Not Available | Positive | 2172607 - 2172855 | 8578.22 |
| short-chain dehydrogenase | DBR11_08920 | Not Available | Negative | 2172905 - 2173780 | 32086.8 |
| hypothetical protein | DBR11_08925 | Not Available | Negative | 2173813 - 2174343 | 19266.6 |
| cyclic nucleotide-binding protein | DBR11_08930 | Not Available | Negative | 2174430 - 2175017 | 22717.7 |
| feob-associated cys-rich membrane protein | DBR11_08935 | Not Available | Negative | 2175036 - 2175194 | 5681.07 |
| hypothetical protein | DBR11_08940 | Not Available | Negative | 2175245 - 2176438 | 46561.2 |
| gmp synthase | DBR11_08945 | Not Available | Negative | 2176422 - 2177267 | 32318.4 |
| carboxylate-amine ligase | DBR11_08950 | Not Available | Negative | 2177269 - 2178372 | 42240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

