Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_08805 | Not Available | Positive | 2152020 - 2152235 | 7751.69 |
| duf4349 domain-containing protein | DBR11_08810 | Not Available | Positive | 2152381 - 2153229 | 32435.9 |
| crossover junction endodeoxyribonuclease ruvc | DBR11_08815 | Not Available | Negative | 2153305 - 2153874 | 20823.6 |
| hypothetical protein | DBR11_08820 | Not Available | Positive | 2153917 - 2154894 | 37858.8 |
| glycosyl transferase | DBR11_08825 | Not Available | Positive | 2154929 - 2156002 | 40441.5 |
| peptide transporter | DBR11_08830 | Not Available | Positive | 2155999 - 2157087 | 39862.6 |
| ribonuclease hii | DBR11_08835 | Not Available | Positive | 2157117 - 2157719 | 22518.2 |
| glycosyl transferase family 4 | DBR11_08840 | Not Available | Positive | 2157802 - 2159004 | 46794.1 |
| glycine cleavage system aminomethyltransferase gcvt | DBR11_08845 | Not Available | Positive | 2159044 - 2160123 | 39691.4 |
| 2-phosphosulfolactate phosphatase | DBR11_08850 | Not Available | Positive | 2160139 - 2160852 | 26228.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

