Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_08655 | Not Available | Negative | 2121044 - 2122594 | 57660.0 |
| duf5009 domain-containing protein | DBR11_08660 | Not Available | Negative | 2122618 - 2123742 | 41797.3 |
| cell surface protein | DBR11_08665 | Not Available | Negative | 2123798 - 2124664 | 31102.9 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_08670 | Not Available | Negative | 2124695 - 2126212 | 56052.5 |
| susc/raga family tonb-linked outer membrane protein | DBR11_08675 | Not Available | Negative | 2126217 - 2129489 | 121124.0 |
| anti-sigma factor | DBR11_08680 | Not Available | Negative | 2129861 - 2131021 | 43472.6 |
| rna polymerase subunit sigma-70 | DBR11_08685 | Not Available | Negative | 2131104 - 2131413 | 12059.0 |
| hypothetical protein | DBR11_08690 | Not Available | Negative | 2131708 - 2133786 | 79983.3 |
| hypothetical protein | DBR11_08695 | Not Available | Negative | 2133886 - 2134437 | 21109.7 |
| hypothetical protein | DBR11_08700 | Not Available | Positive | 2134625 - 2135176 | 20651.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

