Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DBR11_08295 | Not Available | Negative | 2024858 - 2026090 | 45963.0 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DBR11_08300 | Not Available | Negative | 2026094 - 2027524 | 54022.3 |
| hypothetical protein | DBR11_08305 | Not Available | Positive | 2027627 - 2029378 | 66303.1 |
| hypothetical protein | DBR11_08310 | Not Available | Positive | 2029439 - 2031241 | 68658.5 |
| peptidase s9 family protein | DBR11_08315 | Not Available | Negative | 2031274 - 2033331 | 78208.3 |
| branched chain amino acid aminotransferase | DBR11_08320 | Not Available | Negative | 2033500 - 2034564 | 38994.4 |
| phosphoserine phosphatase | DBR11_08325 | Not Available | Negative | 2034685 - 2035980 | 49604.0 |
| nucleoside-diphosphate sugar epimerase | DBR11_08330 | Not Available | Negative | 2035988 - 2036968 | 35547.9 |
| arginase | DBR11_08335 | Not Available | Positive | 2037077 - 2038258 | 44874.9 |
| thioredoxin | DBR11_08340 | Not Available | Positive | 2038355 - 2039491 | 41287.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

