Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_07995 | Not Available | Positive | 1953776 - 1954420 | 24540.7 |
| 3-oxoacyl-acp synthase | DBR11_08000 | Not Available | Positive | 1954485 - 1955570 | 39571.5 |
| hypothetical protein | DBR11_08005 | Not Available | Negative | 1955567 - 1957060 | 56056.0 |
| hypothetical protein | DBR11_08010 | Not Available | Negative | 1957216 - 1957962 | 28735.4 |
| nif3-like dinuclear metal center hexameric protein | DBR11_08015 | Not Available | Negative | 1958232 - 1959329 | 41097.3 |
| hypothetical protein | DBR11_08020 | Not Available | Negative | 1959428 - 1959787 | 13723.1 |
| duf2752 domain-containing protein | DBR11_08025 | Not Available | Negative | 1959780 - 1960112 | 12691.9 |
| transcription-repair coupling factor | DBR11_08030 | Not Available | Positive | 1960189 - 1963530 | 126943.0 |
| hypothetical protein | DBR11_08035 | Not Available | Positive | 1963545 - 1963766 | 8522.69 |
| phosphatidate cytidylyltransferase | DBR11_08040 | Not Available | Negative | 1963763 - 1964572 | 30079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

