Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose oxidase | DBR11_07945 | Not Available | Negative | 1941624 - 1944176 | 98066.0 |
| acyl-acp desaturase | DBR11_07950 | Not Available | Positive | 1944623 - 1945603 | 37954.5 |
| hypothetical protein | DBR11_07955 | Not Available | Negative | 1945607 - 1945706 | 3734.61 |
| glucose-1-phosphate thymidylyltransferase | DBR11_07960 | Not Available | Negative | 1945708 - 1946568 | 31344.0 |
| polysaccharide biosynthesis protein | DBR11_07965 | Not Available | Negative | 1946598 - 1948550 | 73428.6 |
| udp-glcnac--udp-phosphate glcnac-1-phosphate transferase | DBR11_07970 | Not Available | Negative | 1948734 - 1949634 | 33891.9 |
| had family hydrolase | DBR11_07975 | Not Available | Positive | 1949801 - 1950298 | 18660.5 |
| fructose-6-phosphate aldolase | DBR11_07980 | Not Available | Negative | 1950355 - 1951020 | 23700.8 |
| ribosome silencing factor | DBR11_07985 | Not Available | Positive | 1951228 - 1951602 | 14217.6 |
| peptidase m41 | DBR11_07990 | Not Available | Positive | 1951630 - 1953726 | 77357.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

