Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR11_07895 | Not Available | Negative | 1923194 - 1924951 | 63972.4 |
| susc/raga family tonb-linked outer membrane protein | DBR11_07900 | Not Available | Negative | 1924970 - 1928131 | 112366.0 |
| hypothetical protein | DBR11_07905 | Not Available | Positive | 1928289 - 1928630 | 13548.6 |
| 1,4-beta-xylanase | DBR11_07910 | Not Available | Positive | 1928633 - 1929739 | 42848.3 |
| glycosyl hydrolase | DBR11_07915 | Not Available | Positive | 1929743 - 1932586 | 107349.0 |
| hypothetical protein | DBR11_07920 | Not Available | Negative | 1932629 - 1935121 | 94759.8 |
| hypothetical protein | DBR11_07925 | Not Available | Positive | 1935300 - 1936157 | 32860.3 |
| phosphohydrolase | DBR11_07930 | Not Available | Positive | 1936259 - 1936909 | 24456.3 |
| hypothetical protein | DBR11_07935 | Not Available | Positive | 1937022 - 1939199 | 82564.9 |
| alpha-mannosidase | DBR11_07940 | Not Available | Negative | 1939247 - 1941487 | 85393.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

