Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase | DBR11_07840 | Not Available | Positive | 1907125 - 1908024 | 32820.7 |
| alpha-n-arabinofuranosidase | DBR11_07845 | Not Available | Negative | 1908027 - 1909085 | 39123.1 |
| mannonate dehydratase | DBR11_07850 | Not Available | Negative | 1909148 - 1910314 | 43813.9 |
| 3-oxoacyl-acp reductase | DBR11_07855 | Not Available | Negative | 1910357 - 1911097 | 26017.8 |
| laci family transcriptional regulator | DBR11_07860 | Not Available | Negative | 1911094 - 1912128 | 39017.3 |
| laci family transcriptional regulator | DBR11_07865 | Not Available | Negative | 1912213 - 1913262 | 38812.7 |
| carbohydrate kinase | DBR11_07870 | Not Available | Positive | 1913376 - 1914851 | 53699.9 |
| xylose isomerase | DBR11_07875 | Not Available | Positive | 1914874 - 1916205 | 49940.8 |
| sodium transporter | DBR11_07880 | Not Available | Positive | 1916215 - 1917903 | 61714.9 |
| hypothetical protein | DBR11_07890 | Not Available | Negative | 1921515 - 1923158 | 58624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

