Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DBR11_07790 | Not Available | Positive | 1897722 - 1899239 | 58512.0 |
| abc transporter permease | DBR11_07795 | Not Available | Negative | 1899240 - 1900460 | 45851.9 |
| duf1343 domain-containing protein | DBR11_07800 | Not Available | Positive | 1900540 - 1901826 | 47717.9 |
| hypothetical protein | DBR11_07805 | Not Available | Positive | 1901867 - 1902079 | 7909.34 |
| hypothetical protein | DBR11_07810 | Not Available | Negative | 1902111 - 1902389 | 10131.7 |
| hypothetical protein | DBR11_07815 | Not Available | Negative | 1902426 - 1902695 | 9535.8 |
| dna topoisomerase i | DBR11_07820 | Not Available | Negative | 1902827 - 1903867 | 39921.5 |
| methionyl-trna formyltransferase | DBR11_07825 | Not Available | Positive | 1903975 - 1904883 | 33245.4 |
| 4-amino-4-deoxychorismate lyase | DBR11_07830 | Not Available | Negative | 1904878 - 1905717 | 31626.3 |
| rna pseudouridine synthase | DBR11_07835 | Not Available | Negative | 1905721 - 1906752 | 39288.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

