Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | DBR11_07385 | Not Available | Positive | 1784723 - 1785895 | 44043.5 |
| susc/raga family tonb-linked outer membrane protein | DBR11_07390 | Not Available | Positive | 1786094 - 1789465 | 125168.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR11_07395 | Not Available | Positive | 1789486 - 1791051 | 58901.8 |
| phospholipase c, phosphocholine-specific | DBR11_07400 | Not Available | Positive | 1791113 - 1793524 | 91899.2 |
| rna polymerase sigma-70 factor | DBR11_07405 | Not Available | Positive | 1793642 - 1794208 | 22169.9 |
| anti-sigma factor | DBR11_07410 | Not Available | Positive | 1794320 - 1795480 | 43115.4 |
| tonb-dependent receptor | DBR11_07415 | Not Available | Positive | 1795751 - 1799251 | 127747.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_07420 | Not Available | Positive | 1799271 - 1800926 | 62357.2 |
| hypothetical protein | DBR11_07425 | Not Available | Positive | 1801680 - 1802519 | 30721.3 |
| hypothetical protein | DBR11_07430 | Not Available | Negative | 1802565 - 1804943 | 87485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

