Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DBR11_07190 | Not Available | Negative | 1739387 - 1741840 | 92179.3 |
| hypothetical protein | DBR11_07195 | Not Available | Negative | 1741879 - 1743729 | 68463.5 |
| transcriptional regulator | DBR11_07200 | Not Available | Negative | 1743761 - 1744156 | 15331.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DBR11_07205 | Not Available | Negative | 1744212 - 1745480 | 47613.2 |
| biotin synthase biob | DBR11_07210 | Not Available | Negative | 1745482 - 1746459 | 36343.8 |
| dethiobiotin synthase | DBR11_07215 | Not Available | Negative | 1746494 - 1747111 | 22765.9 |
| 8-amino-7-oxononanoate synthase | DBR11_07220 | Not Available | Negative | 1747108 - 1748238 | 41888.1 |
| hypothetical protein | DBR11_07225 | Not Available | Negative | 1748235 - 1748846 | 23229.0 |
| gntr family transcriptional regulator | DBR11_07230 | Not Available | Positive | 1748910 - 1750394 | 55398.2 |
| peptidase s41 | DBR11_07235 | Not Available | Negative | 1750615 - 1753872 | 121733.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

