Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit alpha | DBR11_07085 | Not Available | Negative | 1720901 - 1722991 | 80257.1 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DBR11_07090 | Not Available | Negative | 1722988 - 1723359 | 13925.8 |
| thiol reductase thioredoxin | DBR11_07095 | Not Available | Negative | 1723373 - 1723609 | 8993.96 |
| acyl-coa dehydrogenase | DBR11_07100 | Not Available | Negative | 1723791 - 1725281 | 56329.2 |
| duf305 domain-containing protein | DBR11_07105 | Not Available | Negative | 1725388 - 1725975 | 20991.0 |
| hypothetical protein | DBR11_07110 | Not Available | Positive | 1726061 - 1726789 | 28249.1 |
| endonuclease | DBR11_07115 | Not Available | Negative | 1726794 - 1727528 | 28618.3 |
| ferritin-like domain-containing protein | DBR11_07120 | Not Available | Positive | 1727663 - 1728223 | 20398.2 |
| response regulator | DBR11_07125 | Not Available | Negative | 1728274 - 1728636 | 13614.3 |
| ion channel protein | DBR11_07130 | Not Available | Negative | 1728655 - 1729464 | 29921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

