Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_07035 | Not Available | Positive | 1706513 - 1707655 | 42220.5 |
| susc/raga family tonb-linked outer membrane protein | DBR11_07040 | Not Available | Positive | 1708231 - 1711131 | 106565.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_07045 | Not Available | Positive | 1711143 - 1712783 | 61562.9 |
| metallophosphoesterase | DBR11_07050 | Not Available | Positive | 1712969 - 1714180 | 45591.3 |
| hypothetical protein | DBR11_07055 | Not Available | Negative | 1714242 - 1715492 | 48077.1 |
| phytoene synthase | DBR11_07060 | Not Available | Negative | 1715564 - 1715813 | 9771.78 |
| phytoene desaturase | DBR11_07065 | Not Available | Negative | 1715816 - 1717315 | 56478.8 |
| duf2867 domain-containing protein | DBR11_07070 | Not Available | Positive | 1717561 - 1719030 | 56098.3 |
| hypothetical protein | DBR11_07075 | Not Available | Positive | 1719043 - 1719825 | 29083.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | DBR11_07080 | Not Available | Negative | 1719896 - 1720888 | 38181.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

