Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_06780 | Not Available | Positive | 1645123 - 1645722 | 22208.0 |
| hypothetical protein | DBR11_06790 | Not Available | Positive | 1646933 - 1647581 | 24892.8 |
| glycoside hydrolase family 3 | DBR11_06795 | Not Available | Positive | 1647710 - 1649416 | 63368.6 |
| thioredoxin family protein | DBR11_06800 | Not Available | Negative | 1649422 - 1649955 | 19649.7 |
| dna helicase uvrd | DBR11_06805 | Not Available | Positive | 1650053 - 1653283 | 122049.0 |
| atp-dependent nuclease subunit b | DBR11_06810 | Not Available | Positive | 1653313 - 1656207 | 110108.0 |
| pyruvate dehydrogenase complex e1 component subunit beta | DBR11_06815 | Not Available | Positive | 1656320 - 1657306 | 35932.5 |
| rna-binding transcriptional accessory protein | DBR11_06820 | Not Available | Positive | 1657383 - 1659692 | 84949.0 |
| hypothetical protein | DBR11_06825 | Not Available | Positive | 1660201 - 1660953 | 30623.1 |
| rna-splicing ligase rtcb | DBR11_06830 | Not Available | Positive | 1660959 - 1662359 | 51086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

