Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR11_06530 | Not Available | Negative | 1571651 - 1571875 | 8527.93 |
| phytanoyl-coa dioxygenase | DBR11_06535 | Not Available | Negative | 1572013 - 1572732 | 27649.3 |
| hypothetical protein | DBR11_06540 | Not Available | Negative | 1572779 - 1573975 | 44798.2 |
| xre family transcriptional regulator | DBR11_06545 | Not Available | Negative | 1574055 - 1574615 | 21070.5 |
| catalase/peroxidase hpi | DBR11_06550 | Not Available | Negative | 1574716 - 1576995 | 83057.0 |
| hypothetical protein | DBR11_06555 | Not Available | Negative | 1577112 - 1578623 | 57890.4 |
| hypothetical protein | DBR11_06560 | Not Available | Positive | 1578829 - 1584537 | 195315.0 |
| hypothetical protein | DBR11_06565 | Not Available | Positive | 1584551 - 1585564 | 36394.7 |
| hypothetical protein | DBR11_06570 | Not Available | Positive | 1585592 - 1587589 | 74858.4 |
| llm class flavin-dependent oxidoreductase | DBR11_06575 | Not Available | Positive | 1587729 - 1588736 | 36480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

