Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DBR11_05975 | Not Available | Positive | 1444641 - 1445573 | 36092.9 |
| nad-dependent protein deacylase | DBR11_05980 | Not Available | Positive | 1445592 - 1446278 | 24958.9 |
| dipeptide epimerase | DBR11_05985 | Not Available | Negative | 1446275 - 1447372 | 40757.4 |
| thioredoxin domain-containing protein | DBR11_05990 | Not Available | Positive | 1447422 - 1449434 | 76247.8 |
| peptidylprolyl isomerase | DBR11_05995 | Not Available | Positive | 1449446 - 1449946 | 17939.0 |
| fur family transcriptional regulator | DBR11_06000 | Not Available | Negative | 1450089 - 1450520 | 16193.5 |
| hypothetical protein | DBR11_06005 | Not Available | Negative | 1450525 - 1450962 | 16207.1 |
| abc transporter permease | DBR11_06010 | Not Available | Negative | 1450970 - 1452217 | 45382.1 |
| abc transporter atp-binding protein | DBR11_06015 | Not Available | Negative | 1452214 - 1452843 | 23350.3 |
| merc domain-containing protein | DBR11_06020 | Not Available | Negative | 1453077 - 1453466 | 14264.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

