Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. HMWF019 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2047598 bp
Thymine Count
2061021 bp
Guanine Count
1407723 bp
Cytosine Count
1388793 bp
Genome Length
6906470 bp
Protein-coding Genes
5696 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DBR11_05775 | Not Available | Positive | 1397310 - 1398017 | 26512.1 |
| hypothetical protein | DBR11_05780 | Not Available | Positive | 1398408 - 1398971 | 22042.6 |
| hypothetical protein | DBR11_05785 | Not Available | Positive | 1399057 - 1400184 | 42109.2 |
| susc/raga family tonb-linked outer membrane protein | DBR11_05790 | Not Available | Positive | 1400333 - 1403767 | 126019.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR11_05795 | Not Available | Positive | 1403809 - 1405635 | 68800.7 |
| hypothetical protein | DBR11_05800 | Not Available | Positive | 1405671 - 1406999 | 46467.2 |
| hypothetical protein | DBR11_05805 | Not Available | Positive | 1407036 - 1408481 | 53090.6 |
| hypothetical protein | DBR11_05810 | Not Available | Positive | 1408451 - 1408993 | 20568.9 |
| alpha-n-acetylglucosaminidase | DBR11_05815 | Not Available | Negative | 1408935 - 1411082 | 82515.0 |
| peroxidase | DBR11_05820 | Not Available | Positive | 1411278 - 1412204 | 34564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

